comparative in silico study of sex-determining region y (sry) protein sequences involved in sex-determining
نویسندگان
چکیده
background: the sry gene (sry) provides instructions for making a transcription factor called the sex-determining region y protein. the sex-determining region y protein causes a fetus to develop as a male. in this study, sry of 15 spices included of human, chimpanzee, dog, pig, rat, cattle, buffalo, goat, sheep, horse, zebra, frog, urial, dolphin and killer whale were used for determine of bioinformatic differences. methods: nucleotide sequences of sry were retrieved from the ncbi databank. bioinformatic analysis of sry is done by clc main workbench version 5.5 and clustalw (http:/www.ebi.ac.uk/clustalw/) and mega6 softwares. results: the multiple sequence alignment results indicated that sry protein sequences from orcinus orca (killer whale) and tursiopsaduncus (dolphin) have least genetic distance of 0.33 in these 15 species and are 99.67% identical at the amino acid level. homosapiens and pantroglodytes (chimpanzee) have the next lowest genetic distance of 1.35 and are 98.65% identical at the amino acid level. conclusion: these findings indicate that the sry proteins are conserved in the 15 species, and their evolutionary relationships are similar.
منابع مشابه
Comparative In silico Study of Sex-Determining Region Y (SRY) Protein Sequences Involved in Sex-Determining
Background: The SRY gene (SRY) provides instructions for making a transcription factor called the sex-determining region Y protein. The sex-determining region Y protein causes a fetus to develop as a male. In this study, SRY of 15 spices included of human, chimpanzee, dog, pig, rat, cattle, buffalo, goat, sheep, horse, zebra, frog, urial, dolphin and killer whale were used for determine of bioi...
متن کاملSex-determining Region Y in Mammals
The Sex-determining Region Y (Sry in mammals but SRY in humans [4]) is a gene found on Y chromosomes that leads to the development of male phenotypes, such as testes [5]. The Sry gene, located on the short branch of the Y chromosome, initiates male embryonic development in the XY sex determination [6] system. The Sry gene follows the central dogma of molecular biology; the DNA encoding the gene...
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To gain insight into mechanisms controlling SRY (sex determining region Y)-box 2 (Sox2) protein activity in mouse embryonic stem cells (ESCs), the endogenous Sox2 gene was tagged with FLAG/Hemagglutinin (HA) sequences by homologous recombination. Sox2 protein complexes were purified from Sox2/FLAG/HA knockin ESCs, and interacting proteins were defined by mass spectrometry. One protein in the co...
متن کاملThe molecular action and regulation of the testis-determining factors, SRY (sex-determining region on the Y chromosome) and SOX9 [SRY-related high-mobility group (HMG) box 9].
Despite 12 yr since the discovery of SRY, little is known at the molecular level about how SRY and the SRY-related protein, SOX9 [SRY-related high-mobility group (HMG) box 9], initiate the program of gene expression required to commit the bipotential embryonic gonad to develop into a testis rather than an ovary. Analysis of SRY and SOX9 clinical mutant proteins and XX mice transgenic for testis...
متن کاملTracing paternal ancestry in mice, using the Y-linked, sex-determining locus, Sry.
The molecular evolution of mammalian Y-linked DNA sequences is of special interest because of their unique mode of inheritance: most Y-linked sequences are clonally inherited from father to son. Here we investigate the use of Y-linked sequences for phylogenetic inference. We describe a comparative analysis of a 515-bp region from the male sex-determining locus, Sry, in 22 murine rodents (subfam...
متن کاملExpression of sex-determining region Y-box protein 2 in breast cancer and its clinical significance
Sex-determining region Y-box protein 2 (SOX2) is an embryo transcription factor located on chromosome 3q26.3-q27. It plays an important role in the maintenance of differentiation and self-renewal of pluripotent stem cells. Studies have shown that SOX2 is associated with multiple cancers and is overexpressed in many different phenotypes of breast cancer. To study the relationship between SOX2 an...
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عنوان ژورنال:
reports of biochemistry and molecular biologyجلد ۴، شماره ۲، صفحات ۷۶-۸۱
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